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    <title>Semantic-Mediawiki on Living Systems_</title>
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      <title>New paper on RDFIO for interoperable biomedical data management in Semantic MediaWiki</title>
      <link>https://livesys.se/posts/new-paper-on-rdfio-for-interoperable-biomedical-datamanagement-in-semantic-mediawiki/</link>
      <pubDate>Mon, 11 Sep 2017 15:57:00 +0200</pubDate>
      <guid>https://livesys.se/posts/new-paper-on-rdfio-for-interoperable-biomedical-datamanagement-in-semantic-mediawiki/</guid>
      <description>&lt;p&gt;As my collaborator and M.Sc. supervisor &lt;a href=&#34;https://twitter.com/egonwillighagen&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Egon&#xA;Willighagen&lt;/a&gt;&#xA; already&#xA;&lt;a href=&#34;http://chem-bla-ics.blogspot.nl/2017/09/new-paper-rdfio-extending-semantic.html&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;blogged&lt;/a&gt;&#xA;,&#xA;we just released a paper titled: &amp;ldquo;&lt;a href=&#34;https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-017-0136-y&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;RDFIO: extending Semantic MediaWiki&#xA;for interoperable biomedical data&#xA;management&lt;/a&gt;&#xA;&amp;rdquo;,&#xA;with uses cases from Egon and &lt;a href=&#34;https://twitter.com/pkohonen&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Pekka&#xA;Kohonen&lt;/a&gt;&#xA;, coding help from &lt;a href=&#34;https://twitter.com/ali_king&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Ali&#xA;King&lt;/a&gt;&#xA; and project supervision from &lt;a href=&#34;https://twitter.com/vrandezo&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Denny&#xA;Vrandečić&lt;/a&gt;&#xA;, &lt;a href=&#34;https://www.linkedin.com/in/roland-grafstr%c3%b6m-a86b3b2&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Roland&#xA;Grafström&lt;/a&gt;&#xA; and&#xA;&lt;a href=&#34;https://twitter.com/ola_spjuth&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Ola Spjuth&lt;/a&gt;&#xA;.&lt;/p&gt;&#xA;&lt;p&gt;See the picture below (from the paper) for an overview of all the newly&#xA;developed functionality (drawn in black), as related to the previously&#xA;existing functionality (drawn in grey):&lt;/p&gt;</description>
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      <title>SMWCon Fall 2016 - My talk on large RDF imports</title>
      <link>https://livesys.se/posts/smwcon-fall-2016/</link>
      <pubDate>Fri, 07 Oct 2016 11:50:00 +0200</pubDate>
      <guid>https://livesys.se/posts/smwcon-fall-2016/</guid>
      <description>&lt;p&gt;I was invited to give a talk at &lt;a href=&#34;https://www.semantic-mediawiki.org/wiki/SMWCon_Fall_2016/Conference_Days&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;Semantic MediaWiki (SMW)&#xA;conference&lt;/a&gt;&#xA;&#xA;in Frankfurt last week, on our work on enabling import of RDF datasets into&#xA;&lt;a href=&#34;https://www.semantic-mediawiki.org&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;SMW&lt;/a&gt;&#xA;.  I have presented at SMWCon before&#xA;as well (2011: &lt;a href=&#34;http://saml.rilspace.com/smwcon-fall-2011-impressions&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;blog&lt;/a&gt;&#xA;,&#xA;&lt;a href=&#34;http://www.slideshare.net/SamuelLampa/hooking-up-semantic-mediawiki-with-external-tools-via-sparql&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;slides&lt;/a&gt;&#xA;&#xA;&lt;a href=&#34;https://www.youtube.com/watch?v=3US0G5dDynM&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;video&lt;/a&gt;&#xA;, 2013:&#xA;&lt;a href=&#34;http://www.slideshare.net/SamuelLampa/20131030-smw-con&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;slides&lt;/a&gt;&#xA;), so it was&#xA;nice to re-connect with some old friends, and to get up to date about how SMW&#xA;is developing, as well as share about our own contributions.&lt;/p&gt;&#xA;&lt;ul&gt;&#xA;&lt;li&gt;&lt;strong&gt;Note:&lt;/strong&gt; See also the &lt;a href=&#34;https://storify.com/smllmp/semantic-mediawiki-conference-fall-2016&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;SMWCon 2016 twitter&#xA;storyboard&lt;/a&gt;&#xA;&#xA;for a nice overview of the event.&lt;/li&gt;&#xA;&lt;/ul&gt;&#xA;&lt;h2 id=&#34;the-talk---on-rdf-import-in-semantic-mediawiki&#34;&gt;The Talk - on RDF Import in Semantic MediaWiki&lt;/h2&gt;&#xA;&lt;p&gt;My talk this year was titled &amp;ldquo;Batch import of large RDF datasets using&#xA;RDFIO or the new rdf2smw tool&amp;rdquo;. More info can be found on the&#xA;&lt;a href=&#34;https://www.semantic-mediawiki.org/wiki/SMWCon_Fall_2016/Batch_import_of_large_RDF_datasets_using_RDFIO_or_the_new_rdf2smw_tool&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;talk page&lt;/a&gt;&#xA;&lt;/p&gt;</description>
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